HDExaminer

Sierra Analytics announces the release of version 1.0 of HDExaminer, a complete software solution for bottom-up H-D Exchange MS data analysis.

HDExaminer provides powerful functionality to give a comprehensive picture of the deuteration uptake behavior of a protein. This information can be used to help determine protein folding behavior, protein-drug interactions, and other useful results.
Screenshot

Features:

  • Imports MS data from many different vendor formats
  • Imports peptide search results from SEQUEST HTML, Mascot XML, Proteome Discoverer .xls, pepXML, or generic tabular data, allowing compatibility with many peptide search packages
  • Allows export of all calculated results in graphical or tabular formats
  • Works with both low-resolution and high-resolution data
  • Sophisticated matching algorithm finds peptide isotope clusters even with noisy data or overlapping peptides
    Overlapping Peptides
  • Assigns a confidence level to each peptide isotope cluster match, saving valuable time during manual verification of results
  • Includes comprehensive data visualization tools, including uptake plots and heat maps, allowing you to quickly locate potential trouble spots in your data before they impact your results

Screenshot of Heat Map

HDExaminer is the product of Sierra's years of experience writing H-D Exchange software tools. Please see our publication history with leading researchers in the field.  The result of this extensive experience is a high-quality, easy-to-use software application which is the most widely-useful, vendor-neutral solution available on the market.

A fully-functional 30-day trial version is available upon request.  Please contact sales@MassSpec.com for more information.